Preview - Exploring Dna Replication

Challenge 7: Breaking the Rules

1.)  Return the free nucleotides to approximately 50 and SETUP the simulation, press GO/STOP

DNA-strand-length:  30                                                    Speed:  Normal

Enzyme labels: checked                                                  Substitutions:  unchecked

Nucleo labels: unchecked                                                Free-nucleosides:  50                    Time-limit:  No Limit

2.)  Replicate the top strand of DNA, now.

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3.)  After the top strand is finished, turn SUBSTITUTIONS to ON (check box) and continue by replicating the bottom DNA strand, now.

4.)  Press GO/STOP to end the simulation.

5.)  Check the readout boxes for your top and bottom DNA strands (as in the picture below)

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Questions

Please answer the questions below.

Question 12:  Compare your top and bottom strands; what changed when you turned SUBSTITUTIONS on?    What do you think SUBSTITUTIONS means?

Hint:  You might want to compare this challenge to your results from Part 1 – Challenge 4.

Hint:  In order to see your DNA more clearly, press GO/STOP, change FREE-NUCLEOTIDES to zero, and move the enzymes out of the way, then press GO/STOP again!

Question 13:  What nucleotide pairings do you observe in the bottom strand but not in the top strand?

Reflection Question 3: The changes you observed in the sequence of nucleotides in your DNA strand are called mutations.  There are several different types of mutations.  You simulated substitution mutations, meaning that some nucleotides were paired incorrectly during replication, for example a Thymine might be substituted where a Cytosine should be, or a Guanine substituted for an Adenine.  As a result, the two, new DNA strands that you made in CHALLENGE 7 had different (mutated) sequences. 

 

What other kinds of mutations do you think might happen to change the sequence of nucleotides in DNA?

Notes

These notes will appear on every page in this lesson so feel free to put anything here you'd like to keep track of.